Someone posted before on this (http://puredata.hurleur.com/sujet-8900-audio-error-samples) but it seems the issue was never resolved.
It really didn't seem like it was interfering with my work until last night when I was recording and every once in a while the audio would cut out for a second and the console would display the red "audio I/O error" and would print nothing. The error also displays when I first turn the DSP on, as well.
This also happens to me only when using samples ([tabread4~]?) and not other objects; will confirm later. I'm running OSX 10.6, Pd-extended 43.4, and usually a MOTU 828mkI, though the error also appears when using the built in in/out. I'll test this in Linux later today (though not with the 828).
Maybe using jack as the driver instead of portaudio?